BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C04LP1|AL428183
(200 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig152 383 e-107
>3x_Contig152
Length = 823
Score = 383 bits (190), Expect = e-107
Identities = 194/198 (97%)
Strand = Plus / Plus
Query: 1 gatctcatgctatactccccccccttcctgtcgcacacgattggtgcgcagatattgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gatctcatgctatactccccccccttcctgtcgcacacgattggtgcgcagatattgaag 343
Query: 61 ggggggagtagggagtaataaatttaggataaccattattataataattaattattataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ggggggagtagggagtaataaatttaggataaccattattataataattaattattataa 403
Query: 121 taatattbbbsccccgcggtctctcaccctacgaatgtagggtgatgagccgcggggtaa 180
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 taatatttttcccccgcggtctctcaccctacgaatgtagggtgatgagccgcggggtaa 463
Query: 181 ttcttatttattatatat 198
||||||||||||||||||
Sbjct: 464 ttcttatttattatatat 481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.712 1.32
Gapped
Lambda K H
1.40 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1450
Number of Sequences: 1807
Number of extensions: 1450
Number of successful extensions: 171
Number of sequences better than 1.0e-20: 1
length of query: 200
length of database: 10,358,551
effective HSP length: 15
effective length of query: 185
effective length of database: 10,331,446
effective search space: 1911317510
effective search space used: 1911317510
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.2 bits)